基于文献计量学的环境领域病毒研究现状分析

李中浤; 张列宇; 许秋瑾; 李国文; 李曹乐; 黎佳茜; 李晓光; 陈素华

doi:10.12153/j.issn.1674-991X.20210016

基于文献计量学的环境领域病毒研究现状分析

doi: 10.12153/j.issn.1674-991X.20210016

1.
南昌航空大学环境与化学工程学院
2.
国家环境保护地下水污染过程模拟与控制重点实验室, 中国环境科学研究院

详细信息

作者简介:
李中浤(1995—),男,硕士研究生,主要研究方向为环境微生物学, pl_lizhh@163.com

通讯作者:
陈素华 E-mail: chensuhua@nchu.edu.cn

中图分类号: X503
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出版历程
- 收稿日期: 2021-01-18
- 刊出日期: 2021-11-20

Analysis of virus research status in the environmental filed based on bibliometrics

1.
School of Environmental and Chemical Engineering, Nanchang Hangkong Universityp
2.
State Environmental Protection Key Laboratory of Simulation and Control of Groundwater Pollution, Chinese Research Academy of Environmental Sciences 3.State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences

More Information

Corresponding author: CHEN Suhua E-mail: chensuhua@nchu.edu.cn

摘要

摘要: 为深入了解环境领域病毒研究的最新研究进展、研究热点及发展趋势,客观反映相关国家、机构和个人在该领域的科学贡献和影响,采用ISI Web of Knowledge的Web of Science^TM核心合集数据库,利用HistCite Pro引文图谱分析软件及VOSviewer可视化分析软件,对2000—2020年该库收录的相关文献进行计量分析,从发文量排名前10的国家/地区、高产作者、来源期刊、重要研究机构、研究热点等方面对近20年环境领域病毒的研究现状进行分析。结果表明:2000—2020年环境领域病毒相关期刊发文量总体呈上升趋势,其中由于新型冠状病毒疫情的爆发,2020年环境领域病毒研究发文量激增;该领域研究发文量最多的国家是美国,其次是中国,但中国篇均被引频次较低;发文量排名前3的作者分别为美国学者Gerba C P、Sobsey M D和日本学者Katayama H;发文量排名前3的期刊分别为Water Research、Food and Environmental Virology和Environmental Science & Technology;发文量排名前3的研究机构分别为亚利桑那大学、巴塞罗那大学和美国国家环境保护局;环境领域病毒研究多集中在饮用水、废水、地下水、地表水等水环境领域,研究的病毒种类集中于诺如病毒、甲肝病毒、腺病毒等肠道病毒,环境中病毒的检测和环境介质中病毒的灭活与去除是研究热点。
- 环境 /
- 病毒 /
- 文献计量分析 /
- VOSviewer /
- HistCite Pro
Abstract: In order to deeply understand the latest research progress, hot spots and development trends of virus research in the field of environment, and to objectively reflect the scientific contribution and influence of relevant countries, institutions and individuals in this field, Web of Science^TM core collection database of ISI Web of Knowledge was adopted, and bibliometric analysis carried out on the relevant literatures collected in the database during 2000 to 2020 using HistCite Pro citation atlas analysis software and VOSviewer analysis software. The status of virus research in the environmental field in recent 20 years was analyzed from Top10 countries (regions), high productive authors, source journals, important research institutions, and research hotspots. The results indicated that the number of papers published in journals of virus research in the environmental filed showed an increasing trend from 2000 to 2020. Particularly, the number of articles of virus research in the environmental filed increased sharply in 2020 due to the outbreak of novel coronavirus epidemic; the country with the most published papers in this field was the United States, followed by China, although the average citation frequency was low. The Top3 most productive authors were Gerba C P, Sobsey M D and Katayama H. Top3 journals in this field were Water Research, Food and Environmental Virology and Environmental Science & Technology. The University of Arizona, the University of Barcelona and the US Environmental Protection Agency were among the Top3 institutions with the most publications in this research area. Keywords analysis found that most research focused on the field of water environment, including drinking water, wastewater, groundwater and surface water, etc, and the main viruses studied were norovirus, hepatitis A virus, adenovirus and other enterovirus. Detection of virus in environment and inactivation and removal of virus in environment media were hot topics of virus research in the environmental filed.
- environment /
- virus /
- bibliometric analysis /
- VOSviewer /
- HistCite Pro

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参考文献(39)

[1]	HENDRIX R W. Bacteriophages:evolution of the majority[J]. Theoretical Population Biology, 2002, 61(4):471-480. doi: 10.1006/tpbi.2002.1590
[2]	PIRTLE E C, BERAN G W. Virus survival in the environment[J]. Revue Scientifique et Technique (International Office of Epizootics), 1991, 10(3):733-748.
[3]	HATA A, HANAMOTO S, SHIRASAKA Y, et al. Quantitative distribution of infectious F-specific RNA phage genotypes in surface waters[J]. Applied and Environmental Microbiology, 2016, 82(14):4244-4252. doi: 10.1128/AEM.00621-16
[4]	RZEZ^·UTKA A, COOK N. Survival of human enteric viruses in the environment and food[J]. FEMS Microbiology Reviews, 2004, 28(4):441-453. doi: 10.1016/j.femsre.2004.02.001
[5]	吕凡, 郝丽萍, 章骅, 等. 病毒在环境卫生作业环境中的存活潜力及感染风险防控探讨[J]. 环境卫生工程, 2020, 28(1):1-9. LÜ F, HAO L P, ZHANG H, et al. Survival potential of viruses during environmental sanitation operation and the prevention and control of the infection risk[J]. Environmental Sanitation Engineering, 2020, 28(1):1-9.
[6]	WYNGAERT S, VANHOLSBEECK O, SPAAK P, et al. Parasite fitness traits under environmental variation:disentangling the roles of a chytrid’s immediate host and external environment[J]. Microbial Ecology, 2014, 68(3):645-656. doi: 10.1007/s00248-014-0434-1
[7]	BRISEBOIS E, VEILLETTE M, DION-DUPONT V, et al. Human viral pathogens are pervasive in wastewater treatment center aerosols[J]. Journal of Environmental Sciences, 2018, 67:45-53. doi: 10.1016/j.jes.2017.07.015
[8]	WANG Y L, JIANG X T, LIU L, et al. High-resolution temporal and spatial patterns of virome in wastewater treatment systems[J]. Environmental Science & Technology, 2018, 52(18):10337-10346. doi: 10.1021/acs.est.8b03446
[9]	YU D T, HE J Z, ZHANG L M, et al. Viral metagenomics analysis and eight novel viral genomes identified from the Dushanzi mud volcanic soil in Xinjiang,China[J]. Journal of Soils and Sediments, 2019, 19(1):81-90. doi: 10.1007/s11368-018-2045-9
[10]	CHUAH C J, ZIEGLER A D. Temporal variability of faecal contamination from on-site sanitation systems in the groundwater of northern Thailand[J]. Environmental Management, 2018, 61(6):939-953. doi: 10.1007/s00267-018-1016-7
[11]	la ROSA G, PROROGA Y T R, de MEDICI D, et al. First detection of hepatitis E virus in shellfish and in seawater from production areas in southern Italy[J]. Food and Environmental Virology, 2018, 10(1):127-131. doi: 10.1007/s12560-017-9319-z
[12]	TANG J W. The effect of environmental parameters on the survival of airborne infectious agents[J]. Journal of the Royal Society,Interface, 2009, 6(Suppl 6):S737-S746.
[13]	MOJICA K D A, BRUSSAARD C P D. Factors affecting virus dynamics and microbial host-virus interactions in marine environments[J]. FEMS Microbiology Ecology, 2014, 89(3):495-515. doi: 10.1111/fem.2014.89.issue-3
[14]	HE X R, WU Y Y, YU D J, et al. Exploring the ordered weighted averaging operator knowledge domain:a bibliometric analysis[J]. International Journal of Intelligent Systems, 2017, 32(11):1151-1166. doi: 10.1002/int.2017.32.issue-11
[15]	WAGNER C S, ROESSNER J D, BOBB K, et al. Approaches to understanding and measuring interdisciplinary scientific research (IDR):a review of the literature[J]. Journal of Informetrics, 2011, 5(1):14-26. doi: 10.1016/j.joi.2010.06.004
[16]	OLAWUMI T O, CHAN D W M. A scientometric review of global research on sustainability and sustainable development[J]. Journal of Cleaner Production, 2018, 183:231-250. doi: 10.1016/j.jclepro.2018.02.162
[17]	LUCIO-ARIAS D, LEYDESDORFF L. Main-path analysis and path-dependent transitions in HistCite(TM)-based historiograms[EB/OL]. 2009.https://arxiv.org/abs/0911.1454 .
[18]	ECK N J, WALTMAN L. Citation-based clustering of publications using CitNetExplorer and VOSviewer[J]. Scientometrics, 2017, 111(2):1053-1070. doi: 10.1007/s11192-017-2300-7
[19]	张媛, 张艳杰, 朱静, 等. 基于文献计量的湿地构建前沿进展[J]. 环境工程技术学报, 2021, 11(1):107-113. ZHANG Y, ZHANG Y J, ZHU J, et al. A bibliometric analysis of the frontier progress in wetland construction[J]. Journal of Environmental Engineering Technology, 2021, 11(1):107-113.
[20]	KATAYAMA H, HARAMOTO E, OGUMA K, et al. One-year monthly quantitative survey of noroviruses,enteroviruses,and adenoviruses in wastewater collected from six plants in Japan[J]. Water Research, 2008, 42(6/7):1441-1448. doi: 10.1016/j.watres.2007.10.029
[21]	ZHI W, JI G D. Constructed wetlands,1991-2011:a review of research development,current trends,and future directions[J]. Science of the Total Environment, 2012, 441:19-27. doi: 10.1016/j.scitotenv.2012.09.064
[22]	苗静, 张坤明, 李君文, 等. 几种典型介水传播病毒流行现状及检测技术研究进展[J]. 解放军预防医学杂志, 2017, 35(7):822-826. MIAO J, ZHANG K M, LI J W, et al. Research progress on epidemic status and detection techniques of several typical water-borne viruses[J]. Journal of Preventive Medicine of Chinese PLA, 2017, 35(7):822-826.
[23]	FARKAS K, WALKER D I, ADRIAENSSENS E M, et al. Viral indicators for tracking domestic wastewater contamination in the aquatic environment[J]. Water Research, 2020, 181:115926. doi: 10.1016/j.watres.2020.115926
[24]	DIAS E, EBDON J, TAYLOR H. The application of bacteriophages as novel indicators of viral pathogens in wastewater treatment systems[J]. Water Research, 2018, 129:172-179. doi: 10.1016/j.watres.2017.11.022
[25]	KITAJIMA M, SASSI H P, TORREY J R. Pepper mild mottle virus as a water quality indicator[J]. Npj Clean Water, 2018, 1:19. doi: 10.1038/s41545-018-0019-5
[26]	GALL A M, MARIÑAS B J, LU Y, et al. Waterborne viruses:a barrier to safe drinking water[J]. PLoS Pathogens, 2015, 11(6):e1004867. doi: 10.1371/journal.ppat.1004867. doi: 10.1371/journal.ppat.1004867
[27]	董慧峪, 李凌菲, 刘沛峰, 等. 饮用水消毒工艺对病毒的灭活[J]. 环境工程学报, 2020, 14(7):1718-1727. DONG H Y, LI L F, LIU P F, et al. Inactivation of virus by drinking water disinfection process[J]. Chinese Journal of Environmental Engineering, 2020, 14(7):1718-1727.
[28]	ADEFISOYE M A, NWODO U U, GREEN E, et al. Quantitative PCR detection and characterisation of human adenovirus,rotavirus and hepatitis A virus in discharged effluents of two wastewater treatment facilities in the eastern cape,south Africa[J]. Food and Environmental Virology, 2016, 8(4):262-274. doi: 10.1007/s12560-016-9246-4
[29]	PRADO T, de CASTRO BRUNI A, BARBOSA M R F, et al. Performance of wastewater reclamation systems in enteric virus removal[J]. Science of the Total Environment, 2019, 678:33-42. doi: 10.1016/j.scitotenv.2019.04.435
[30]	MIURA T, OKABE S, NAKAHARA Y, et al. Removal properties of human enteric viruses in a pilot-scale membrane bioreactor (MBR) process[J]. Water Research, 2015, 75:282-291. doi: 10.1016/j.watres.2015.02.046
[31]	MCCALL C, XAGORARAKI I. Metagenomic approaches for detecting viral diversity in water environments[J]. Journal of Environmental Engineering, 2019, 145(8):04019039. doi: 10.1061/(ASCE)EE.1943-7870.0001548
[32]	王新珍, 王凤花, 孙瑞波, 等. 高通量测序技术在微生物分子生态学研究中的应用[J]. 中国生态农业学报, 2018, 26(10):1593-1600. WANG X Z, WANG F H, SUN R B, et al. Application of high-throughput DNA sequencing in microbial ecology[J]. Chinese Journal of Eco-Agriculture, 2018, 26(10):1593-1600.
[33]	SCHUSTER S C. Next-generation sequencing transforms today’s biology[J]. Nature Methods, 2008, 5(1):16-18. doi: 10.1038/nmeth1156
[34]	BREITBART M, SALAMON P, ANDRESEN B, et al. Genomic analysis of uncultured marine viral communities[J]. Proceedings of the National Academy of Sciences of the United States of America, 2002, 99(22):14250-14255.
[35]	LÓPEZ-BUENO A, TAMAMES J, VELÁZQUEZ D, et al. High diversity of the viral community from an Antarctic lake[J]. Science, 2009, 326(5954):858-861. doi: 10.1126/science.1179287
[36]	GUERRERO-LATORRE L, ROMERO B, BONIFAZ E, et al. Quito’s virome:metagenomic analysis of viral diversity in urban streams of Ecuador’s capital city[J]. Science of the Total Environment, 2018, 645:1334-1343. doi: 10.1016/j.scitotenv.2018.07.213
[37]	AW T G, HOWE A, ROSE J B. Metagenomic approaches for direct and cell culture evaluation of the virological quality of wastewater[J]. Journal of Virological Methods, 2014, 210:15-21. doi: 10.1016/j.jviromet.2014.09.017
[38]	ADRIAENSSENS E M, van ZYL L, de MAAYER P, et al. Metagenomic analysis of the viral community in Namib Desert hypoliths[J]. Environmental Microbiology, 2015, 17(2):480-495. doi: 10.1111/1462-2920.12528
[39]	ANGLY F E, FELTS B, BREITBART M, et al. The marine viromes of four oceanic regions[J]. PLoS Biology, 2006, 4(11):368.